PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0034s0127.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 343aa    MW: 39118.8 Da    PI: 7.0059
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0034s0127.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.61.6e-13234305171
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr 71 
                          +W+++e+ +L+ea  ++  +l+r++l+  +W+e ++k+ ++  + rs ++C++k++ l+kry+k+k+ ++++
  Kaladp0034s0127.1.p 234 EWSEHETFLLLEAWGDRYLQLGRKSLRSDDWKELAEKVsEASEIDRSDVECRNKMDTLKKRYRKEKAKMEQN 305
                          5*************************************667889**********************999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.9E-19234305No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MYLKSCYEEA QHQTAHSSLL ASPAHLLLLL PPSIFTPETR SSLPNPKIKI SFLFPPKFRS  60
KHTPDLKLQF SLFLNFPLHP SSLDLFFRSL ILMDDSEQNT RYPQMRFPVT SRHQPTYGSQ  120
SSRSLVPVRN QTHLRPVNFT RFKEDYGEDE VDDDEDSYEI EETGYGGMNG GRADFSRGGL  180
EEEEYGNGNR IEFGGGLERN SKKRKMKSVM DYEDGGSANG GGSRELGARN GIREWSEHET  240
FLLLEAWGDR YLQLGRKSLR SDDWKELAEK VSEASEIDRS DVECRNKMDT LKKRYRKEKA  300
KMEQNYTDSM KGAFSRPVCW PSVEAKCAGN YGSPHVNLKN IC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.13e-24Trihelix family protein